| Event | Record Holder | Time(Year) | 1998 NAIA Qualifying Time |
| 50 yd Freestyle | Tucker Jackson | :21.94 (1998) | :22:30 |
| 100 yd Freestyle | Nathan Engman | :47.45 (1996) | :48.99 |
| 200 yd Freestyle | Nathan Engman | 1:43.49 (1996) | 1:49.89 |
| 500 yd Freestyle | Garrett Hageman | 4:51.23 (1997) | 4:56.63 |
| 1,000 yd Freestyle | Garrett Hageman | 10:11.47 (1996) | ****** |
| 1,650 yd Freestyle | Garrett Hageman | 16:58.25 (1996) | 17:30.16 |
| 100 yd Backstroke | Scott Daukas | :53.82 (1995) | :56.90 |
| 200 yd Backstroke | Scott Daukas | 1:57.90 (1995) | 2:04.12 |
| 100 yd Breaststroke | Scott Daukas | 1:00.53 (1995) | 1:03.58 |
| 200 yd Breaststroke | Jason Ridle | 2:12.71 (1996) | 2:18.17 |
| 100 yd Butterfly | Gary Ames | :51.33 (1992) | :54.99 |
| 200 yd Butterfly | Gary Ames | 1:54.06 (1993) | 2:03.45 |
| 200 yd I.M. | Scott Daukas | 1:56.43 (1995) | 2:03.08 |
| 400 yd I.M. | Scott Daukas | 4:12.93 (1995) | 4:32.23 |
| 200 yd Medley Relay | John O'Donnell, Dan Mahi Gary Ames, Josiah Pettersen | 1:40.66 (1992) | 1:49.15 |
| 400 yd Medley Relay | John O'Donnell, Dan Mahi Gary Ames, Josiah Pettersen | 3:36.90 (1992) | 3:54.41 |
| 200 yd Freestyle Relay | Garrett Hageman, Mike Horn Jason Ridle, Nathan Engman | 1:28.02 (1996) | 1:35.04 |
| 400 yd Freestyle Relay | Nathan Engman, Scott Daukas Mike Horn, Jason Ridle | 3:14.17 (1996) | 3:25.95 |
| 800 yd Freestyle Relay | Scott Daukas, Nathan Engman Jason Ridle, Garrett Hagerman | 7:09.63 (1996) | 7:41.79 |
| Event | Record Holder | Time (Year) | 1998 NAIA Qualifying Time |
| 50 yd Freestyle | Michelle Zinanti | :24.75 (1991) | :26.01 |
| 100 yd Freestyle | Michelle Zinanti | :53.93 (1991) | :57.05 |
| 200 yd Freestyle | Michelle Zinanti | 1:54.14 (1992) | 2:04.31 |
| 500 yd Freestyle | Michelle Zinanti | 5:12.54 (1992) | 5:32.63 |
| 1,000 yd Freestyle | Shauna Banks Coleman | 10:50.86 (1994) | ****** |
| 1,650 yd Freestyle | Shauna Banks Coleman | 17:59.01 (1994) | 19:34.63 |
| 100 yd Backstroke | Jenny Russell | 1:03.27 (1988) | 1:05.22 |
| 200 yd Backstroke | Kim Adler | 2:14.11 (1998) | 2:20.88 |
| 100 yd Breastroke | Abby Hulme | 1:09.47 (1995) | 1:13.49 |
| 200 yd Breastroke | Abby Hulme | 2:30.71 (1996) | 2:39.51 |
| 100 yd Butterfly | Vicki Romero | 1:02.22 (1984) | 1:04.34 |
| 200 yd Butterfly | Kim Streeter | 2:16.61 (1988) | 2:22.83 |
| 200 yd I.M. | Shauna Banks Coleman | 2:14.91 (1994) | 2:20.02 |
| 400 yd I.M. | Shauna Banks Coleman | 4:42.85 (1994) | 5:03.06 |
| 200 yd Medley Relay | Jennifer Weiss, Castle Funatake Carol Brooks, Kim Adler | 1:56.57 (1997) | 2:08.41 |
| 400 yd Medley Relay | Kim Adler, Abby Hulme Joan Ogle, Brynne Hamilton | 4:14.04 (1996) | 4:41.76 |
| 200 yd Freestyle Relay | Kathy Farrell, Kris Daughters Kim Streeter, Michelle Zinanti | 1:43.94 (1991) | 1:53.83 |
| 400 yd Freestyle Relay | Kathy Farrell, Kris Daughters Audrey Anderson, Michelle Zinanti | 3:43.00 (1992) | 4:09.00 |
| 800 yd Freestyle Relay | Kris Daughters, Kathy Farrell, Kim Streeter, Michelle Zinanti | 8:00.58 (1991) | 9:05.44 |